Workflows

Sort by:
Showing 17 results. Use the filters on the left and the search box below to refine the results.
Curation: not runnable
Original Uploader

Workflow BioAID_DiseaseDiscovery_RatHumanMouseUnipr... (4)

Created: 15/12/08 @ 20:46:09 | Last updated: 11/08/11 @ 09:22:23

Credits: User Marco Roos Network-member AID

License: Creative Commons Attribution-Share Alike 3.0 Unported License

Thumb
This workflow finds disease relevant to the query string via the following steps: 1. A user query: a list of terms or boolean query - look at the Apache Lucene project for all details. E.g.: (EZH2 OR "Enhancer of Zeste" +(mutation chromatin) -clinical); consider adding 'ProteinSynonymsToQuery' in front of the input if your query is a protein. 2. Retrieve documents: finds 'maximumNumberOfHits' relevant documents (abstract+title) based on query (the AIDA service inside is based on Apa...

Rating: 4.0 / 5 (2 ratings) | Versions: 4 | Reviews: 0 | Comments: 3 | Citations: 0

Viewed: 4266 times | Downloaded: 664 times

Tags (9):

Original Uploader

Workflow EBI_InterProScan (3)

Created: 26/10/08 @ 20:33:34 | Last updated: 01/04/11 @ 08:52:28

Credits: User Hamish McWilliam

License: Creative Commons Attribution 3.0 Unported License

Thumb
Note: the WSInterProScan web service used by this workflow is no longer available haveing been replaced by the EMBL-EBI's InterProScan (REST) (http://www.ebi.ac.uk/Tools/webservices/services/pfa/iprscan_rest) and InterProScan (SOAP) (http://www.ebi.ac.uk/Tools/webservices/services/pfa/iprscan_soap) web services. Thus the workflow described here no longer works, see the alternative workflows for the InterProScan (SOAP) service for workflows which use the new services. Perform an InterProScan ...

Rating: 0.0 / 5 (0 ratings) | Versions: 3 | Reviews: 0 | Comments: 1 | Citations: 0

Viewed: 1444 times | Downloaded: 401 times

Tags (10):

Original Uploader

Workflow HUMAN Microarray CEL file to candidate pat... (4)

Created: 03/10/07 @ 18:35:55 | Last updated: 26/11/09 @ 17:34:24

License: Creative Commons Attribution-No Derivative Works 3.0 Unported License

Thumb
This workflow takes in a CEL file and a normalisation method then returns a series of images/graphs which represent the same output obtained using the MADAT software package (MicroArray Data Analysis Tool) [http://www.bioinf.manchester.ac.uk/MADAT/index.html]. Also returned by this workflow are a list of the top differentialy expressed genes (size dependant on the number specified as input - geneNumber), which are then used to find the candidate pathways which may be influencing the observed ...

Rating: 5.0 / 5 (2 ratings) | Versions: 4 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 1463 times | Downloaded: 413 times

Tags (12):

Original Uploader

Workflow Success-Abandonment-Classification (3)

Created: 06/02/08 @ 14:35:41 | Last updated: 02/07/08 @ 17:15:25

Credits: User Andrea Wiggins User James Howison

License: Creative Commons Attribution-Share Alike 3.0 Unported License

Thumb
Retrieves data from FLOSSmole and from the Notre Dame SourceForge repository to compute project statistics based on releases, downloads and project lifespan. Project statistics are then used to classify projects according to the criteria set up in English & Schweik, but comparison criteria are parameterized so that a different set of criterion thresholds can be used to evaluate the project characteristics.

Rating: 5.0 / 5 (2 ratings) | Versions: 3 | Reviews: 0 | Comments: 1 | Citations: 0

Viewed: 2077 times | Downloaded: 6673 times

Tags (6):

Original Uploader

Workflow Gi_to_pathway.xml (1)

Created: 12/07/08 @ 09:20:04 | Last updated: 12/07/08 @ 20:07:57

Credits: User Paul Fisher

License: Creative Commons Attribution-Share Alike 3.0 Unported License

Thumb
No description

Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 101 times | Downloaded: 47 times

Tags (1):

Original Uploader

Workflow complete_2_text_mining.xml (1)

Created: 12/07/08 @ 09:33:56 | Last updated: 12/07/08 @ 09:35:15

Credits: User Paul Fisher

License: Creative Commons Attribution-Share Alike 3.0 Unported License

Thumb
No description

Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 80 times | Downloaded: 47 times

Tags (1):

Original Uploader

Workflow maxdBrowse.xml (1)

Created: 12/07/08 @ 09:53:37 | Last updated: 12/07/08 @ 09:54:51

Credits: User Paul Fisher

License: Creative Commons Attribution-Share Alike 3.0 Unported License

Thumb
No description

Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 32 times | Downloaded: 28 times

Tags (1):

Original Uploader

Workflow text_mining.xml (1)

Created: 12/07/08 @ 09:42:44 | Last updated: 12/07/08 @ 09:43:00

Credits: User Paul Fisher

License: Creative Commons Attribution-Share Alike 3.0 Unported License

Thumb
No description

Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 59 times | Downloaded: 40 times

Tags (1):

Original Uploader

Workflow complete.xml (1)

Created: 12/07/08 @ 09:51:09 | Last updated: 12/07/08 @ 09:51:36

Credits: User Paul Fisher

License: Creative Commons Attribution-Share Alike 3.0 Unported License

Thumb
No description

Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 44 times | Downloaded: 32 times

Tags (1):

Original Uploader

Workflow complete_2.xml (1)

Created: 12/07/08 @ 09:44:05 | Last updated: 12/07/08 @ 09:44:22

Credits: User Paul Fisher

License: Creative Commons Attribution-Share Alike 3.0 Unported License

Thumb
No description

Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 46 times | Downloaded: 40 times

Tags (1):

Sort by:

Results per page:

New/Upload

Log in / Register

Username or Email:

Password:

Remember me:

OR

Use OpenID:


(eg: name.myopenid.com)

Need an account?
Click here to register

Forgot Password?

Front Page

Home

Invite people to myExperiment Alpha

Help pages

About Us

News and Events

Mailing List

Contact Us

Developers

Publications


Taverna Workflow Workbench

myGrid

BioCatalogue

Trident

Google Coop Search

EPSRC

JISC

Microsoft

Powered by:

Rails

Icons:
Silk icon set 1.3