Workflow Entry: Explain concept scores

Created at: 07/02/12 @ 11:05:50      Last updated: 14/09/12 @ 10:01:37
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Title: Explain concept scores

Type: Taverna 2

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Workflow Other workflows that use similar services (10)

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Original Uploader

Workflow Get Concept IDs (4)

Created: 06/07/12 @ 14:17:35 | Last updated: 14/09/12 @ 09:54:38

Credits: User Kristina Hettne User Reinout van Schouwen User Martijn Schuemie User Marco Roos Network-member BioSemantics

License: Creative Commons Attribution-Share Alike 3.0 Unported License

Purpose: The workflow retrieves the concepts within a concept set. Author comments: This workflow can be used together with other workflows in this pack: for functional gene and SNP annotation and knowledge discovery.

Rating: 0.0 / 5 (0 ratings) | Versions: 4 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 8 times | Downloaded: 0 times

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Original Uploader

Workflow Match gene lists based on information in l... (7)

Created: 17/04/12 @ 08:55:46 | Last updated: 25/04/12 @ 07:54:26

Credits: User Marco Roos User Reinout van Schouwen User Eleni User Kristina Hettne Network-member BioSemantics

Attributions: Workflow Match concept profiles Workflow Explain concept scores

License: Creative Commons Attribution-Share Alike 3.0 Unported License

[THIS WORKFLOW IS IN BETA STAGE] This workflow computes the match between two lists of Entrez Gene Identifiers by means of concept profile matching (Jelier et al., van Haagen et al.). The result of this is a list of concepts ordered by their matching score (the length of the list set by maxMatchNr). Of this list the summed scores are explained by computing the concepts that contribute most to the combination of the matching genes. Example to explain (by analogy): When a group of informatic...

Rating: 0.0 / 5 (0 ratings) | Versions: 7 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 51 times | Downloaded: 10 times

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