Workflow Entry: Get homologous from NCBI homoloGene using a list of UniProt accessions

Created at: 14/10/11 @ 17:45:28      Last updated: 27/10/11 @ 10:39:21
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Version created on: 14/10/11 @ 17:45:28 by: Rafael C. Jimenez

Last edited on: 27/10/11 @ 10:39:25 by: Rafael C. Jimenez

Title: Get homologous from NCBI homoloGene using a list of UniProt accessions

Type: Taverna 2


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Workflow Other workflows that use similar services (8)

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Original Uploader

Workflow Get homologous from NCBI homoloGene using ... (1)

Created: 14/10/11 @ 17:26:32 | Last updated: 14/10/11 @ 17:26:28

Credits: User Rafael C. Jimenez

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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Get homologous from NCBI homoloGene for one UniProt protein accession. Use PICR to convert UniProt to RefSeq, get homologous from homoloGene and convert RefSeq results to UniProt. Be patient, the workflows has to bring a file around 11Mb. ftp://ftp.ncbi.nlm.nih.gov/pub/HomoloGene/README

Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 35 times | Downloaded: 6 times

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Original Uploader

Workflow getUPIForSequence workflow (2)

Created: 06/06/08 @ 09:59:59 | Last updated: 06/06/08 @ 10:07:06

Credits: User Franck Tanoh

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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Given a sequence retrieve the UPI (UniProt Archive (UniParc)) identifier.

Rating: 0.0 / 5 (0 ratings) | Versions: 2 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 32 times | Downloaded: 0 times

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