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Workflow Entry: HUMAN Microarray CEL file to candidate pathways

Created at: 03/10/07 @ 18:35:55      Last updated: 26/11/09 @ 17:34:24
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Version created on: 03/10/07 @ 18:35:55 by: Paul Fisher   |   Revision comment Expand

Last edited on: 26/11/09 @ 17:34:25 by: Paul Fisher

Title: HUMAN Microarray CEL file to candidate pathways

Type: Taverna 1


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Original Uploader

Workflow Cow-Human Ortholog Pathways and Gene annot... (2)

Created: 03/10/07 @ 18:36:00 | Last updated: 03/12/09 @ 16:16:31

License: Creative Commons Attribution-No Derivative Works 3.0 Unported License

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This workflow searches for genes which reside in a QTL (Quantitative Trait Loci) region in the cow, Bos taurus. The workflow requires an input of: a chromosome name or number; a QTL start base pair position; QTL end base pair position. Data is then extracted from BioMart to annotate each of the genes found in this region. As the Cow genome is currently unfinished, the workflow subsequently maps the cow ensembl gene ids to human orthologues. Entrez and UniProt identifiers are then identified...

Rating: 0.0 / 5 (0 ratings) | Versions: 2 | Reviews: 0 | Comments: 1 | Citations: 0

Viewed: 124 times | Downloaded: 55 times

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Original Uploader

Workflow unnested_qtl_pathway_2.xml (1)

Created: 12/07/08 @ 09:15:13 | Last updated: 12/07/08 @ 20:20:52

Credits: User Paul Fisher

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 85 times | Downloaded: 45 times

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Non-Information Resource URI: http://alpha.myexperiment.org/workflows/10


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