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Items tagged with "image" (56)

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Blob Wound Image Data Mining

Created: 17/04/11 @ 14:00:45 | Last updated: 04/05/11 @ 12:35:28

Credits: User Dr. Sven Van Poucke

Attributions: Workflow Wound Image Data Mining Blob Wound Image Data Mining

License: Creative Commons Attribution-Share Alike 3.0 Unported License

The aim of research behind this file is to discover the way our previously published color-calibration algorithm influences de detection and description of salient points. A recent paper can be found at: http://www.biomedcentral.com/1471-2342/10/7. Other work: Automatic Colorimetric Calibration of Chronic Wound Imaging. S. Van Poucke, Y. Vander Haeghen, K. Vissers, T. Meert, P. G. Jorens BMC Med Imaging. 2010 Mar 18;10:7 Comparative analysis of two methods for wound bed area measur...

File type: Trident (Package)

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Workflows (55)
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Workflow Fetch Dragon images from BioMoby (3)

Created: 05/03/08 @ 14:09:35 | Last updated: 14/07/10 @ 16:46:37

Credits: User Tomoinn

License: Creative Commons Attribution 3.0 Unported License

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Fetch images and annotations of snapdragons

Rating: 0.0 / 5 (0 ratings) | Versions: 3 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 326 times | Downloaded: 112 times

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Workflow Search InChI in ChemSpider (1)

Created: 30/03/09 @ 09:24:33 | Last updated: 30/03/09 @ 09:43:07

Credits: User Michael Gerlich

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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This workflows queries ChemSpider for compound information and compound images. Note that a Chemspider security token is needed in order to access some of the ChemSpider services (receive one by registering at ChemSpider). Possible search terms might be InChI codes, ChemSpider identifiers or names.

Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 57 times | Downloaded: 25 times

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Workflow Search InChI in NCBI eSearch (pccompound) (1)

Created: 30/03/09 @ 09:26:25 | Last updated: 30/03/09 @ 09:47:00

Credits: User Michael Gerlich

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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This workflow takes in a search term (e.g. InChI) for search in PubChem pccompound database. The result is an xml file containing summary information about the search term and also a compound image and the compound webpage fetched from Pubchem.

Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 103 times | Downloaded: 50 times

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Workflow MassBank to KEGG (1)

Created: 30/03/09 @ 09:30:32 | Last updated: 30/03/09 @ 09:49:13

Credits: User Michael Gerlich

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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Workflow that queries MassBank DB to retrieve database identifiers (KEGG, PubChem, InChI) and continue search with them to retrieve pathways from KEGG for given compound identifier,searches PubChem via eutils and PUG, queries ChemSpider for compound information and image. Note: Usage of ChemSpider web services requires a valid security token - receive one by registering at ChemSpider (look at your profile to see your token)

Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 215 times | Downloaded: 0 times

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Workflow Fetch today's xkcd comic (1)

Created: 03/07/09 @ 14:40:25

Credits: User Stian Soiland-Reyes

Attributions: Workflow Fetch today's xkcd comic

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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Use the local java plugins and some filtering operations to fetch the comic strip image from http://xkcd.com/ Based on the FetchDailyDilbert workflow.

Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 126 times | Downloaded: 81 times

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Workflow Calculating frequencies of gene expression... (1)

Created: 15/03/10 @ 08:43:31

Credits: User Peter Li

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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This workflow retrieves data from the MaxD microarray database and calculates the frequencies of gene expression levels using an R script

Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 64 times | Downloaded: 0 times

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Workflow Construction of skeleton SBML model using ... (1)

Created: 26/03/10 @ 17:08:13 | Last updated: 26/03/10 @ 17:13:15

Credits: User Peter Li

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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This workflow generates a skeleton SBML model consisting of the metabolic reactions for a given list of yeast enzymes ORF numbers

Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 39 times | Downloaded: 22 times

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Workflow Construction of skeleton SBML model using ... (1)

Created: 26/03/10 @ 17:11:26 | Last updated: 26/03/10 @ 17:12:06

Credits: User Peter Li

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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This workflow generates a skeleton SBML model consisting of the metabolic reactions for a given subsystem term.

Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 55 times | Downloaded: 25 times

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Workflow Copasi time simulation of SBML model (1)

Created: 26/03/10 @ 17:23:25

Credits: User Peter Li

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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Uses the synchronous Copasi time simulation web service to predict the concentrations of species over a time period. The results from Copasi are provided in SBRML format which is visualised as a graph using an R script.

Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 85 times | Downloaded: 39 times

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Workflow Get compound thumbnail (1)

Created: 13/07/10 @ 11:29:03 | Last updated: 13/07/10 @ 11:29:04

Credits: User Peter Li

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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Returns a small image of the 2D structure of given chemical compound represented by its chemspider identifier

Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 26 times | Downloaded: 10 times

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Workflow Fetch Dragon images from BioMoby (1)

Created: 14/07/10 @ 16:20:46 | Last updated: 14/07/10 @ 16:20:48

Credits: User EdwardKawas User Tomoinn

Attributions: Workflow Fetch Dragon images from BioMoby

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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Fetch images and annotations of snapdragons

Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 24 times | Downloaded: 14 times

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Workflow WPS orchestration example, image metadata ... (1)

Created: 03/03/11 @ 09:26:24 | Last updated: 03/03/11 @ 09:26:28

Credits: User Jorgejesus

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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1 image inputs (GeoTIFF, JPEG,PNG), metadata from gdalinfo and histogram analisys, histogram result is a PNG image in base64 coding (default WPS service encoding) that will be converted to binary.

Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 46 times | Downloaded: 21 times

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Workflow Automated Image Registration (1)

Created: 06/04/11 @ 00:35:21 | Last updated: 06/04/11 @ 00:35:26

Credits: User Pipeline

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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This is a simple registration workflow. The structural MRI images are aligned to a standard brain image by using AIR registration tools. To build this workflow follow the steps mentioned on the following pages. URL: http://www.loni.ucla.edu/Software/AIR Try this Pipeline Workflow Now!

Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 24 times | Downloaded: 9 times

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Workflow Local Shape Analysis (LSA) Workflow (1)

Created: 06/04/11 @ 00:40:19 | Last updated: 06/04/11 @ 00:40:26

Credits: User Pipeline

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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This workflow takes raw un-skull-stripped volumes in 2 groups/populations and an ROI index to generate a color-coded shape object using the per-vertex local p-values of some local shape-measure (e.g., displacement, atrophy, Jacobian, curvature, etc). It also outputs the p-values color-map superimposed on the mean shape. Problem addressed by this workflow   Identifying local group differences between 2 populations in one specific ROI. This workflow also generates mean-shape DX mo...

Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 14 times | Downloaded: 7 times

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Workflow BrainParser: Automated Volume Calculation ... (1)

Created: 06/04/11 @ 01:01:22 | Last updated: 06/04/11 @ 01:01:27

Credits: User Pipeline

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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This workflow takes raw un-skull-stripped volumes and generates tables of the volumes for all 56 ROIs currently automatically extracted using LONI BrainParser.   Problem addressed by this workflow Computing and tabulating the Brain Volumes of 56 cortical and sub-cortical ROIs. This workflow also generates DX models of all 56 ROIs which can be viewed as a scene in ShapeViewer.   Detailed Workflow Usage & Specifications Input: Any volumetric file format can be use...

Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 19 times | Downloaded: 9 times

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Workflow Image Registration Meta Algorithm (IRMA) (1)

Created: 06/04/11 @ 01:39:08 | Last updated: 14/07/11 @ 01:09:06

Credits: User Pipeline

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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Overview - Workflow-Title In this workflow different registration algorithms are applied to the same image and the image that is best registered to the template is chosen as the output top candidate.   Problem addressed by this workflow In this workflow various registration algorithm is performed on the same subject. The algorithm that gives the best result is chosen. This might be different for different input images. This workflow is robust and picks the best-registered imag...

Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 17 times | Downloaded: 5 times

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Workflow CGR from multiple fasta files (1)

Created: 29/04/11 @ 15:26:53 | Last updated: 29/04/11 @ 15:33:03

Credits: User cory (Kazuki Oshita)

License: GNU General Public License (GPL) 2.0

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 The workflow generates Chaos Game Represenations (CGR) image from multiple fasta files. See http://www.g-language.org/wiki/cgr for more information about the Chaos Game Representations.

Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 28 times | Downloaded: 14 times

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Workflow Extract histogram features from image file (1)

Created: 16/06/11 @ 17:09:20 | Last updated: 04/04/12 @ 08:01:37

Credits: User Roman

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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As a template for creation of image workflows was used xa-toolwrapper project from Sven Schlarb (https://github.com/openplanets/scape/tree/master/xa-toolwrapper). This project enables creation of WSDL web service that wraps command line tool like ‘extractFeatures’ or ‘create’. The workflow for ‘extractFeatures’ tool has two input parameters. The URL to the input image file and the number of histogram bins as integer. This workflow extracts histogram feature...

Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 36 times | Downloaded: 8 times

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Workflow Compare histogram features of image files (1)

Created: 16/06/11 @ 17:22:04 | Last updated: 04/04/12 @ 08:00:53

Credits: User Roman

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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As a template for creation of image workflows was used xa-toolwrapper project from Sven Schlarb (https://github.com/openplanets/scape/tree/master/xa-toolwrapper). This project enables creation of WSDL web service that wraps command line tool like ‘extractFeatures’ or ‘create’. The workflow for ‘compare’ tool has three input parameters. These are two URLs to the XML histogram files that comprise information about image features. These files are acquired us...

Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 36 times | Downloaded: 8 times

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Workflow Extract histogram features from image file... (1)

Created: 01/07/11 @ 13:15:37 | Last updated: 04/04/12 @ 08:00:05

Credits: User Roman

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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The main element of this workflow is a RESTful service designed in the SCAPE QA command line tools RESTful package https://github.com/openplanets/scape/tree/master/pc-qa-toolwrapper-rest. The Github project https://github.com/openplanets/scape/tree/master/xa-rester from Andy Jackson is a basis implementation for pc-qa-toolwrapper-rest package. The QA REST package enables creation of RESTful web service that wraps QA command line tool like ‘extractfeatures’ or ‘create’...

Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 28 times | Downloaded: 9 times

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Workflow Common SCAPE QA command line tool RESTful ... (1)

Created: 01/07/11 @ 13:48:30 | Last updated: 04/04/12 @ 07:59:17

Credits: User Roman

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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The QA REST package enables creation of RESTful web service that wraps any QA command line tools. The main element of this workflow is a RESTful service designed in the SCAPE QA command line tools RESTful package https://github.com/openplanets/scape/tree/master/pc-qa-toolwrapper-rest. The Github project https://github.com/openplanets/scape/tree/master/xa-rester from Andy Jackson is a basis implementation for pc-qa-toolwrapper-rest package. The workflow comprises path to the RESTful servi...

Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 249 times | Downloaded: 8 times

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Workflow Image metadata extraction (1)

Created: 31/08/11 @ 12:02:29 | Last updated: 31/08/11 @ 12:02:31

Credits: User Harvey

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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This workflow invokes the gdalinfo service and will list various information about a GDAL supported raster dataset of the image ( GeoTIFF, PNG, JPEG and GIF.).

Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 84 times | Downloaded: 6 times

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Workflow TIFF to PNG (1)

Created: 31/08/11 @ 12:04:44 | Last updated: 31/08/11 @ 12:04:47

Credits: User Harvey

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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This workflow can convert Image format from TIFF to PNG. This workflow is one of the example for GENESI-DEC ontology.

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Viewed: 50 times | Downloaded: 13 times

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Workflow Fetch today'sVG Cats comic (1)

Created: 14/09/11 @ 04:32:48 | Last updated: 14/09/11 @ 05:01:30

Credits: User Gstalloch User Tomoinn User Stian Soiland-Reyes User Alan Williams

Attributions: Workflow Fetch today's xkcd comic

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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Use the local java plugins and some filtering operations to fetch the comic strip image from http://xkcd.com/ Based on the FetchDailyDilbert workflow.

Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 8 times | Downloaded: 7 times

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Workflow Fetch today's cat and girl comic (1)

Created: 14/09/11 @ 04:38:01 | Last updated: 14/09/11 @ 04:39:29

Credits: User Atminer

Attributions: Workflow Fetch today's xkcd comic

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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Use the local java plugins and some filtering operations to fetch the comic strip image from http://catandgirl.com/, your major source of essential lead. Based on the Fetch today's xkcd workflow.

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Viewed: 19 times | Downloaded: 4 times

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Workflow Geottif image reprojection (1)

Created: 16/09/11 @ 17:32:25 | Last updated: 16/09/11 @ 17:32:29

Credits: User Jorgejesus

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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Example of a WPS service that reprojects a geoTIFF by using a EPSG code. THe example image is in EPSG:32119, lcc projection for north caroline and it comes from GRASS-GIS spearfish dataset. The image is reprojected into EPSG:4326 (lat/long): Metadata: http://rsg.pml.ac.uk/wps/generic.cgi?request=describeProcess&service=wps&identifier=reprojectImage&version=1.0.0 Library: gdalwarp

Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 22 times | Downloaded: 5 times

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Workflow Convert a URL to an image - IST 600 (1)

Created: 28/09/11 @ 07:26:22 | Last updated: 28/09/11 @ 07:26:26

Credits: User Gstalloch

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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This workflow converts the Lackadaisy Cats comic to an image in Kepler.

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Viewed: 14 times | Downloaded: 11 times

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Workflow Fetch a cat and girl comic (1)

Created: 28/09/11 @ 13:59:53 | Last updated: 28/09/11 @ 14:00:52

Credits: User Atminer

License: Creative Commons Attribution-Share Alike 3.0 Unported License

This workflow retrieves the cat and girl comic whose name is specified in the URL constant.

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Viewed: 11 times | Downloaded: 9 times

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Workflow r.stats workflow for pixel statistics (1)

Created: 02/11/11 @ 09:58:42 | Last updated: 02/11/11 @ 10:00:42

Credits: User Jorgejesus

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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r.stats operation for image. Output will group pixels by: DN, total area, relative %. This worflow is used inside the ice Class exampel as a nested workflow

Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 22 times | Downloaded: 8 times

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Workflow Calculate edit distance based on words (1)

Created: 14/11/11 @ 15:12:18 | Last updated: 14/11/11 @ 15:13:26

Credits: User perdalum

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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 Calculate the word based edit distance between a scan of an OCR image and its ground truth.

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Viewed: 36 times | Downloaded: 12 times

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Workflow Image files comparison using histograms an... (2)

Created: 22/11/11 @ 12:29:08 | Last updated: 23/11/11 @ 13:47:20

Credits: User Roman

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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This workflow extracts histogram and profile features from image file applying image processing command line tool. Necessary configuration files are stored on Github (https://github.com/openplanets/scape/tree/master/pc-qa-toolwrapper). As a template for creation of image workflows was used xa-toolwrapper project from Sven Schlarb (https://github.com/openplanets/scape/tree/master/xa-toolwrapper). This workflow provides WSDL web service that wraps command line tool with tho options ‘extra...

Rating: 0.0 / 5 (0 ratings) | Versions: 2 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 41 times | Downloaded: 7 times

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Workflow NCBI Gi to Kegg Pathway Images (2)

Created: 12/01/12 @ 09:38:10 | Last updated: 12/01/12 @ 15:04:00

Credits: User Katy Wolstencroft User Paul Fisher

Attributions: Workflow NCBI Gi to Kegg Pathways

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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This workflow accepts a list of genbank gene identifiers and returns descriptions of gene functions and a list of all pathways each gene is involved in, according to the KEGG database.

Rating: 0.0 / 5 (0 ratings) | Versions: 2 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 23 times | Downloaded: 21 times

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Workflow dcraw (sRGB, ColorInterpolated, FixedWhite... (2)

Created: 08/12/11 @ 18:57:06 | Last updated: 16/12/11 @ 17:54:02

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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Reads a RAW image with these parameters using dcraw and returns the image data as byte array.

Rating: 0.0 / 5 (0 ratings) | Versions: 2 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 16 times | Downloaded: 9 times

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Workflow dcraw (sRGB, ColorInterpolated, FixedWhite... (2)

Created: 08/12/11 @ 18:55:19 | Last updated: 16/12/11 @ 17:53:02

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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Reads a RAW image with these parameters using dcraw and returns the image data as byte array.

Rating: 0.0 / 5 (0 ratings) | Versions: 2 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 15 times | Downloaded: 10 times

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Workflow dcraw (NoConversion, NoInterpretation, Fix... (4)

Created: 08/12/11 @ 18:22:28 | Last updated: 16/12/11 @ 17:52:34

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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Reads a RAW image with these parameters using dcraw and returns the image data as byte array.

Rating: 0.0 / 5 (0 ratings) | Versions: 4 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 5 times | Downloaded: 3 times

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Workflow Convert by target path (1)

Created: 21/02/12 @ 17:21:20 | Last updated: 14/08/12 @ 12:35:59

Credits: User Markus Plangg

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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Converts a file to a target format depending on the target path extension.

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Viewed: 18 times | Downloaded: 5 times

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Workflow Get image mimetype (1)

Created: 21/02/12 @ 17:24:40 | Last updated: 21/02/12 @ 17:24:41

Credits: User Markus Plangg

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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Returns the mimetype of an image.

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Viewed: 6 times | Downloaded: 4 times

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Workflow RAWverna Image evaluation - Read image (RA... (1)

Created: 21/02/12 @ 17:33:10 | Last updated: 21/02/12 @ 17:33:11

Credits: User Markus Plangg

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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Reads an image for evaluation by RAWverna. The read parameters depend on the type of this image and the image for comparison.

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Viewed: 6 times | Downloaded: 3 times

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Workflow RAWverna Image evaluation - Read images (R... (1)

Created: 21/02/12 @ 17:37:37 | Last updated: 21/02/12 @ 17:37:38

Credits: User Markus Plangg

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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Reads images for evaluation by RAWverna. The read parameters depend on the type of the images.

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Viewed: 5 times | Downloaded: 4 times

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Workflow RAWverna Image evaluation - Read Image (RAW) (1)

Created: 21/02/12 @ 17:39:52 | Last updated: 21/02/12 @ 17:39:53

Credits: User Markus Plangg

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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Reads an image from the given path using dcraw for image comparison.

Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 10 times | Downloaded: 4 times

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Workflow RAWverna Image Evaluator - Evaluate Equals (1)

Created: 21/02/12 @ 17:46:15 | Last updated: 21/02/12 @ 17:46:16

Credits: User Markus Plangg

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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Takes two images as byte array and compares them for equality using the RAWverna Image Evaluator.

Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 6 times | Downloaded: 5 times

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Workflow RAWverna Image Evaluator - Evaluate others (1)

Created: 21/02/12 @ 17:46:55 | Last updated: 21/02/12 @ 17:46:56

Credits: User Markus Plangg

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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Takes two images as byte array and compares them using the RAWverna Image Evaluator.

Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 4 times | Downloaded: 5 times

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Workflow RAWverna Image Evaluator - Evaluate relative (1)

Created: 21/02/12 @ 17:47:34 | Last updated: 21/02/12 @ 17:47:35

Credits: User Markus Plangg

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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Takes two images as byte array and compares them using the RAWverna Image Evaluator.

Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 4 times | Downloaded: 5 times

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Workflow RAWverna Image Evaluator - Evaluate ssim (1)

Created: 21/02/12 @ 17:48:23 | Last updated: 21/02/12 @ 17:48:24

Credits: User Markus Plangg

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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Takes two images as byte array and compares them using the RAWverna Image Evaluator.

Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 13 times | Downloaded: 8 times

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Workflow Anatomical Atlas Generation (1)

Created: 29/05/12 @ 07:05:03 | Last updated: 29/05/12 @ 07:06:36

Credits: User Gimias

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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Computes an anatomical atlas based on a set of patient images using registration methods. This workflow is automatic and does not require user interaction. The anatomical atlas is composed of a mean image and the set of transformations for each patient's between the mean image and the patient image. The atlas can be used to segment the mean image once and propagate the segmentation results to each patient image automatically. This workflow has been tested using GIMIAS-1.5 (open source) with ...

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Workflow Image Characterisation - Fits (Simple) (1)

Created: 27/02/12 @ 16:04:46 | Last updated: 27/02/12 @ 16:04:47

Credits: User Markus Plangg

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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Extracts metadata from images.

Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 7 times | Downloaded: 4 times

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Workflow Image Characterisation - Fits (Extended) (1)

Created: 06/06/12 @ 13:21:43 | Last updated: 06/06/12 @ 13:21:44

Credits: User Markus Plangg

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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Extracts metadata from images.

Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 20 times | Downloaded: 6 times

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Workflow Simple executable plan example (1)

Created: 29/06/12 @ 15:48:43

Credits: User Markus Plangg

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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A simple executable plan containing a migration action component and a QA component. The migration action uses imagemagick convert. The QA component consists of two characterisation components (fits) and another QA components (imagemagick compare).

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Viewed: 21 times | Downloaded: 3 times

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Workflow Migration Imagemagick convert (2)

Created: 03/09/12 @ 14:20:31 | Last updated: 04/09/12 @ 13:01:28

Credits: User Markus Plangg

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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Converts an image using imagemagick convert

Rating: 0.0 / 5 (0 ratings) | Versions: 2 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 14 times | Downloaded: 2 times

Tags (7):

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Workflow HFC Synoptic map from date (1)

Created: 05/11/12 @ 12:48:40

Credits: User David PS

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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query the HELIO Feature Catalogue, and retrieves the image with all the features catalgued for certain date.

Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 25 times | Downloaded: 0 times

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Workflow AIT Matchbox Scenario All (1)

Created: 24/11/12 @ 22:39:18 | Last updated: 24/11/12 @ 22:39:19

Credits: User Roman Network-member SCAPE

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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In this scenario matchbox will find duplicates in passed digital collection. All matchbox workflow steps are executed automatically in one turn. User will get a list of duplicates in result. Matchbox in this scenario is installed on remote Linux VM. Digital collection is stored on Windows machine.

Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 24 times | Downloaded: 0 times

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Workflow AIT Matchbox Scenario Professional (3)

Created: 24/11/12 @ 22:47:17 | Last updated: 24/11/12 @ 22:56:24

Credits: User Roman Network-member SCAPE

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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In this scenario matchbox will find duplicates in passed digital collection. Each matchbox workflow step can be executed separately. User will get a list of duplicates in result. Matchbox in this scenario is installed on remote Linux VM. Digital collection is stored on Windows machine. This workflow starts duplicate finding process using the FindDuplicates python script of the matchbox tool. Matchbox tool support python in version 2.7. Execution starts from the directory where python scripts ...

Rating: 0.0 / 5 (0 ratings) | Versions: 3 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 11 times | Downloaded: 1 time

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Workflow AIT Matchbox Scenario Find Duplicates usin... (1)

Created: 24/11/12 @ 23:04:32

Credits: User Roman Network-member SCAPE

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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In this scenario matchbox will find duplicates in passed digital collection. All matchbox workflow steps are defined separately using input parameter sequence: clean, extract, train, bowhist and compare. User will get a list of duplicates in result. Matchbox in this scenario is installed on remote Linux VM. Digital collection is stored on Windows machine.

Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 6 times | Downloaded: 0 times

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Workflow AIT Matchbox Scenario Check Duplicate Pair... (1)

Created: 24/11/12 @ 23:13:53

Credits: User Roman Network-member SCAPE

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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In this scenario matchbox will check duplicate pair of previously found duplicates in passed digital collection if output information was lost. The pair check does not require the time consumpting whole analysis and is very fast. Matchbox in this scenario is installed on remote Linux VM. Digital collection is stored on Windows machine.

Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 7 times | Downloaded: 0 times

Tags (5):

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