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Items tagged with "segmentation" (3)

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Files (1)

Blob ProStack Screencast: Segmentation of Images of Gene ...

Created: 20/05/10 @ 19:48:40

Credits: User Konstantin Kozlov

License: Creative Commons Attribution-Noncommercial-No Derivative Works 3.0 Unported License

ProStack (Processing of Stacks) is a platform for image processing and analysis. It implements various image processing methods as separate modules, that can be joined in a complex image processing scenario by use of a graphical user interface. This video demonstrates the workflow for extraction of quantitative information on gene expression from confocal images. ProStack home page: urchin.spbcas.ru/downloads/ProStack/ProStack.htm Download:sourceforge.net/projects/prostack/

File type: AVI video

Rating: 0.0 / 5 (0 ratings) | Comments: 0 | Viewed: 16 times | Downloaded: 7 times

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Workflows (2)
Original Uploader

Workflow Sub-Volume Probabilistic Atlas Segmentaito... (1)

Created: 06/04/11 @ 00:24:00 | Last updated: 06/04/11 @ 00:24:06

Credits: User Pipeline

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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This workflow takes a raw unskull-stripped volume and a brain mask of the volume to create a tissue segmented image.This workflow is based on a novel genetic algorithm based finite mixture model and a local 3D Markov random field segmentation algorithm based on iterative conditional modes algorithm. Problem addressed by this workflow   This workflow performs tissue segmentation on the brain volumes using genetic algorithm based finite mixture model (GAMIXTURE), local 3D Markov ...

Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 14 times | Downloaded: 6 times

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Original Uploader

Workflow Anatomical Atlas Generation (1)

Created: 29/05/12 @ 07:05:03 | Last updated: 29/05/12 @ 07:06:36

Credits: User Gimias

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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Computes an anatomical atlas based on a set of patient images using registration methods. This workflow is automatic and does not require user interaction. The anatomical atlas is composed of a mean image and the set of transformations for each patient's between the mean image and the patient image. The atlas can be used to segment the mean image once and propagate the segmentation results to each patient image automatically. This workflow has been tested using GIMIAS-1.5 (open source) with ...

Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 30 times | Downloaded: 8 times

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