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Items tagged with "systems_biology" (5)

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Workflows (4)
Original Uploader

Workflow Construction of skeleton SBML model using ... (1)

Created: 26/03/10 @ 17:11:26 | Last updated: 26/03/10 @ 17:12:06

Credits: User Peter Li

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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This workflow generates a skeleton SBML model consisting of the metabolic reactions for a given subsystem term.

Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 55 times | Downloaded: 25 times

Tags (6):

Original Uploader

Workflow SBML model parameterisation (1)

Created: 26/03/10 @ 17:20:14

Credits: User Peter Li

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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This workflow parameterises an SBML model generated by the qualitative SBML model construction workflow

Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 65 times | Downloaded: 25 times

Tags (4):

Original Uploader

Workflow SBML model optimisation (1)

Created: 26/03/10 @ 17:21:53

Credits: User Peter Li

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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This workflow modifies reaction kinetic parameters against experimental data stored in the MCISB key results database

Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 61 times | Downloaded: 22 times

Tags (4):

Original Uploader

Workflow Copasi time simulation of SBML model (1)

Created: 26/03/10 @ 17:23:25

Credits: User Peter Li

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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Uses the synchronous Copasi time simulation web service to predict the concentrations of species over a time period. The results from Copasi are provided in SBRML format which is visualised as a graph using an R script.

Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 85 times | Downloaded: 39 times

Tags (6):

Packs (1)
Creator

Pack Systematic integration of experimental data and mode...


Created: 25/03/10 @ 20:31:36 | Last updated: 26/03/10 @ 17:23:44

 A pack of workflows for the construction, parameterisation, optimisation and simulation of SBML models.

0 items in this pack

Comments: 0 | Viewed: 40 times | Downloaded: 0 times

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